The Tracts Program

Annotated sequence file	Extract using mRNA Extract using CDS

Alternate Sequence Entry File Enter sequence here when no annotaion is supplied, or when supplied separately (in the upper window).

Binary Motif - Select the tracts to search for None
R [G+A] (purine) Y [T+C] (pyrimidine)	K [G+T] (keto) M [A+C] (amino)	S [G+C] (strong) W [A+T] (weak)

Select unary base(selecting a single base will disable Tracts): A(ADENINE) C(CYTOSINE) G(GUANINE) T(THYMINE)

Match Level:

100% 95% 90% 85% 80% 75% 70%

Comment:

Select Output Report
	Tract List - For tracts greater or equal to:	50 49 48 47 46 45 44 43 42 41 40 39 38 37 36 35 34 33 32 31 30 29 28 27 26 25 24 23 22 21 20 19 18 17 16 15 14 13 12 11 10 9 8 7
	Tract frequencies
	Sub-Region Distribution - For tracts greater or equal to:	50 49 48 47 46 45 44 43 42 41 40 39 38 37 36 35 34 33 32 31 30 29 28 27 26 25 24 23 22 21 20 19 18 17 16 15 14 13 12 11 10 9 8 7
	Annotated Sequence - For tracts greater or equal to:	50 49 48 47 46 45 44 43 42 41 40 39 38 37 36 35 34 33 32 31 30 29 28 27 26 25 24 23 22 21 20 19 18 17 16 15 14 13 12 11 10 9 8 7
	Gene table

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Attention:
* Entering altered GeneBank or EMBL annotation file can lead to partial results in the regions (Exons, Introns & Intercoding)
  display and calculations. The tracts are not effected by the annotation data.
* Entering corrupted or non standard data may cause unpredicted result.
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